The notebook

Notes for the space
between model and experiment.

Seven original essays on how to read scientific machine learning. Follow the evidence from a model output to a claim that can be tested.

Research practice

What turns a prediction into a discovery claim?

A useful prediction changes the next experiment. The strength of the discovery claim depends on what that experiment can rule out.

Molecular science

A dataset split is a scientific experiment

The test set defines the kind of unfamiliarity a molecular model must handle. Choose that unfamiliarity before comparing scores.

Life sciences

Reading a protein structure as a functional hypothesis

A predicted structure can organize an experiment without settling what a protein does in its biological setting.

Materials

The distance between a promising material and a usable sample

Candidate ranking is only one decision in a synthesis workflow. A useful evaluation follows the material into the laboratory.

Physics & simulation

What a physical constraint buys a learned surrogate

A small equation residual is evidence about one test. Reliable use also depends on boundaries, regimes, and accumulated error.

Earth & climate

Why weather skill needs a separate climate argument

Short-range predictive skill and long-term climate claims require different evidence, even when they describe the same atmosphere.

Research practice

Keeping controls inside an AI experiment loop

An adaptive system needs a record of its decisions and controls that survive adaptation. Otherwise, iteration can outrun inference.